DPB1*8601, a previously unrecognized DPB1 variant in the Caucasoid population

Tissue Antigens. 2001 Jun;57(6):536-9. doi: 10.1034/j.1399-0039.2001.057006536.x.

Abstract

A new, previously unrecognized DPB1* allele, DPB1*8601, was found in a Swedish family. The new allele was carried on the common North European haplotype HLA A1-B8-DR3. Both individuals carrying the new allele were initially typed as clear DPB1*4601,*6601 but after family studies and further typing with allele-specific primers it was concluded that a new allele was present together with the common DPB1*0401. The new allele was investigated by direct sequencing of exon 2 in both forward and reverse directions employing intron primers combined with either an allele-specific sense or anti-sense biotinylated primer for bi-directional sequencing. The new allele is identical to DPB1*1701 in the five first variable regions. In the sixth region, however, DPB1*8601 carries the GGPM motif shared by several common alleles such as DPB1*0201 and 0401and 0402.

Publication types

  • Comparative Study

MeSH terms

  • Alleles
  • Amino Acid Sequence
  • Base Sequence
  • Exons / genetics*
  • Genetic Variation
  • HLA-DP Antigens / genetics*
  • HLA-DP beta-Chains
  • Haplotypes
  • Heterozygote
  • Histocompatibility Testing
  • Humans
  • Immunoglobulin Variable Region / genetics*
  • Molecular Sequence Data
  • Pedigree
  • Sequence Alignment
  • White People / genetics*

Substances

  • HLA-DP Antigens
  • HLA-DP beta-Chains
  • HLA-DPB1 antigen
  • Immunoglobulin Variable Region

Associated data

  • GENBANK/AJ271373