Mutations in SID2, a novel gene in Saccharomyces cerevisiae, cause synthetic lethality with sic1 deletion and may cause a defect during S phase

Genetics. 2001 Sep;159(1):17-33. doi: 10.1093/genetics/159.1.17.

Abstract

SIC1 encodes a nonessential B-type cyclin/CDK inhibitor that functions at the G1/S transition and the exit from mitosis. To understand more completely the regulation of these transitions, mutations causing synthetic lethality with sic1 Delta were isolated. In this screen, we identified a novel gene, SID2, which encodes an essential protein that appears to be required for DNA replication or repair. sid2-1 sic1 Delta strains and sid2-21 temperature-sensitive strains arrest preanaphase as large-budded cells with a single nucleus, a short spindle, and an approximately 2C DNA content. RAD9, which is necessary for the DNA damage checkpoint, is required for the preanaphase arrest of sid2-1 sic1 Delta cells. Analysis of chromosomes in mutant sid2-21 cells by field inversion gel electrophoresis suggests the presence of replication forks and bubbles at the arrest. Deleting the two S phase cyclins, CLB5 and CLB6, substantially suppresses the sid2-1 sic1 Delta inviability, while stabilizing Clb5 protein exacerbates the defects of sid2-1 sic1 Delta cells. In synchronized sid2-1 mutant strains, the onset of replication appears normal, but completion of DNA synthesis is delayed. sid2-1 mutants are sensitive to hydroxyurea indicating that sid2-1 cells may suffer DNA damage that, when combined with additional insult, leads to a decrease in viability. Consistent with this hypothesis, sid2-1 rad9 cells are dead or very slow growing even when SIC1 is expressed.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alleles
  • Anaphase
  • Cell Cycle Proteins*
  • Cell Nucleus / metabolism
  • Cell Separation
  • Chromosomes / metabolism
  • Cloning, Molecular
  • Cyclin-Dependent Kinase Inhibitor Proteins
  • Cytoplasm / metabolism
  • DNA Damage
  • DNA Repair
  • DNA-Binding Proteins*
  • Electrophoresis, Polyacrylamide Gel
  • Flow Cytometry
  • Fungal Proteins / genetics
  • Gene Deletion
  • Gene Library
  • Genetic Complementation Test
  • Hydroxyurea / pharmacology
  • Microscopy, Fluorescence
  • Models, Genetic
  • Mutagenesis, Site-Directed
  • Mutation*
  • Phenotype
  • Plasmids / metabolism
  • Precipitin Tests
  • Protein Binding
  • Protein Kinases / chemistry*
  • Protein Kinases / genetics*
  • Protein Kinases / metabolism
  • Recombinant Fusion Proteins
  • S Phase
  • Saccharomyces cerevisiae / chemistry*
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae Proteins*
  • Staphylococcal Protein A / metabolism
  • Temperature
  • Time Factors
  • Transcription Factors / metabolism
  • Two-Hybrid System Techniques

Substances

  • Cell Cycle Proteins
  • Cyclin-Dependent Kinase Inhibitor Proteins
  • DNA-Binding Proteins
  • Fungal Proteins
  • Recombinant Fusion Proteins
  • SIC1 protein, S cerevisiae
  • Saccharomyces cerevisiae Proteins
  • Staphylococcal Protein A
  • TAH11 protein, S cerevisiae
  • Transcription Factors
  • Protein Kinases
  • Hydroxyurea