Genotypic characteristics of bovine viral diarrhea virus 2 strains isolated in northern Italy

J Vet Med Sci. 2001 Sep;63(9):1045-9. doi: 10.1292/jvms.63.1045.

Abstract

Two strains of Bovine viral diarrhea virus 2 (BVDV-2) were isolated from calves in northern Italy. Variations in the 5'-untranslated region (UTR) of the genome were studied by primary structure alignment and neighbor-joining method based phylogenetic tree analyses and by palindromic nucleotide substitutions at the three variable loci in the 5'-UTR. Genetic analysis indicated their appurtenance to genovar BVDV-2a. Nucleotide sequence at the 5'-UTR of strain BS-95-II, one of the Italian isolates from healthy calves, showed 98% homology to that of the Japanese isolate OY89, a cytopathic strain derived from cattle with mucosal disease.

MeSH terms

  • 5' Untranslated Regions / chemistry
  • 5' Untranslated Regions / genetics*
  • Animals
  • Base Sequence
  • Bovine Virus Diarrhea-Mucosal Disease / classification
  • Bovine Virus Diarrhea-Mucosal Disease / virology*
  • Cattle
  • Cluster Analysis
  • DNA, Viral / chemistry
  • DNA, Viral / genetics*
  • Diarrhea Viruses, Bovine Viral / chemistry
  • Diarrhea Viruses, Bovine Viral / classification
  • Diarrhea Viruses, Bovine Viral / genetics*
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Phylogeny
  • Sequence Homology, Nucleic Acid

Substances

  • 5' Untranslated Regions
  • DNA, Viral

Associated data

  • GENBANK/AJ288903
  • GENBANK/AJ293603