The mRNA of DEAD box protein p72 is alternatively translated into an 82-kDa RNA helicase

J Biol Chem. 2002 Jan 11;277(2):1066-75. doi: 10.1074/jbc.M107535200. Epub 2001 Oct 23.

Abstract

p68 and p72 are two highly related DEAD box proteins with similar biochemical activities in the nucleus of vertebrate cells; it is unknown whether they have redundant or differential in vivo functions. We report on a third member of this subfamily that is alternatively expressed from p72 mRNA. A detailed analysis of HeLa p72 mRNA was performed. It has an overall length of more than 5 kb and contains a 0.75-kb 5'-untranslated region and a 3'-untranslated region of 2.5 kb. Its open reading frame extends to nucleotide -243 upstream of the first in-frame AUG (A in the AUG triplet is +1) which serves as the p72 translation initiator codon. We provide evidence that alternative translation at a non-AUG within the extra coding region of this mRNA yields an 82-kDa protein (p82). Immunological studies substantiate that p82 is a naturally existing p72 variant and that both proteins are expressed at similar concentrations. p82 purified from HeLa cells is an ATP-dependent RNA helicase with biochemical properties almost identical to those of p72.

MeSH terms

  • 5' Untranslated Regions
  • Adenosine Triphosphatases / genetics
  • Adenosine Triphosphatases / metabolism*
  • Alternative Splicing / genetics*
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • COS Cells
  • Cell Nucleus / metabolism
  • DEAD-box RNA Helicases
  • HeLa Cells
  • Humans
  • Molecular Sequence Data
  • Molecular Weight
  • Nuclear Proteins / chemistry
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Phosphorylation
  • RNA Helicases / genetics
  • RNA Helicases / metabolism*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • RNA-Binding Proteins / chemistry
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Regulatory Sequences, Nucleic Acid

Substances

  • 5' Untranslated Regions
  • Nuclear Proteins
  • RNA, Messenger
  • RNA-Binding Proteins
  • Adenosine Triphosphatases
  • DDX17 protein, human
  • DEAD-box RNA Helicases
  • RNA Helicases