Isolation and characterization of two genes encoding ubiquitin fused to a ribosomal protein of 53 amino acids in rice

DNA Seq. 2001 Jul;12(1):53-8. doi: 10.3109/10425170109042050.

Abstract

We isolated and determined the nucleotide sequences of two genes encoding ubiquitin fused to a ribosomal protein, Ub-CEP52, from rice (Oryza sativa L.). The deduced amino-acid sequences of the two genes were found to be completely identical. The N-terminal region of 76 residues corresponds to ubiquitin, and the C-terminal region of 53 residues corresponds to ribosomal protein L40. A putative TATA-like sequence, a polypyrimidine sequence, and a similar sequence to telo-box were found in the promoter regions of the two genes. Furthermore, the putative tRNA(Pro) gene was found in the 5'-upstream region of one of them.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Artificial Gene Fusion
  • Base Sequence
  • Cloning, Molecular
  • DNA, Complementary / genetics
  • DNA, Plant / genetics
  • Genes, Plant*
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Oryza / genetics*
  • Plant Proteins / genetics*
  • Protein Precursors / genetics*
  • RNA, Plant / chemistry
  • RNA, Plant / genetics
  • RNA, Transfer, Pro / chemistry
  • RNA, Transfer, Pro / genetics
  • Ribosomal Proteins / genetics*
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Ubiquitin / genetics*
  • Ubiquitins / genetics*

Substances

  • DNA, Complementary
  • DNA, Plant
  • Plant Proteins
  • Protein Precursors
  • RNA, Plant
  • RNA, Transfer, Pro
  • Ribosomal Proteins
  • Ubiquitin
  • Ubiquitins
  • ribosomal protein L40, rat
  • ubiquitin precursor

Associated data

  • GENBANK/AB047855
  • GENBANK/AB047856