Promoter-specific functions of CIITA and the MHC class II enhanceosome in transcriptional activation

EMBO J. 2002 Mar 15;21(6):1379-88. doi: 10.1093/emboj/21.6.1379.

Abstract

Transcription of the major histocompatibility complex class II family of genes is regulated by conserved promoter elements and two gene-specific trans-activators, RFX and CIITA. RFX binds DNA and nucleates the assembly of an enhanceosome, which recruits CIITA through protein--protein interactions. Transcriptional activation is a complex, multi-step process involving chromatin modification and recruitment of the transcription apparatus. To examine the roles of the enhanceosome and CIITA in these processes, we analysed the level of promoter-associated hyperacetylated histones H3 and H4, TBP, TFIIB and RNA poly merase II in cells lacking RFX or CIITA. We compared four genes co-regulated by RFX and CIITA (HLA-DRA, HLA-DPB, HLA-DMB and Ii) and found that the enhanceosome and CIITA make variable, promoter-dependent contributions to histone acetylation and transcription apparatus recruitment. CIITA is generally implicated at multiple levels of the activation process, while the enhanceosome contributes in a CIITA-independent manner only at certain promoters. Our results support the general notion that the impact of a particular activator on transcription in vivo may vary depending on the promoter and the chromatin context.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Acetyltransferases / metabolism
  • Antigens, Differentiation, B-Lymphocyte / genetics*
  • B-Lymphocytes / cytology
  • Cell Line
  • DNA-Binding Proteins / metabolism
  • Enhancer Elements, Genetic*
  • Genes, MHC Class II*
  • HLA-D Antigens / genetics*
  • HLA-DP Antigens / genetics
  • HLA-DR Antigens / genetics
  • HLA-DR alpha-Chains
  • Histocompatibility Antigens Class II / genetics*
  • Histone Acetyltransferases
  • Histones / metabolism
  • Humans
  • Nuclear Proteins*
  • Promoter Regions, Genetic*
  • Regulatory Factor X Transcription Factors
  • Saccharomyces cerevisiae Proteins*
  • Trans-Activators / genetics
  • Trans-Activators / metabolism*
  • Transcription Factors / metabolism
  • Transcriptional Activation*

Substances

  • Antigens, Differentiation, B-Lymphocyte
  • DNA-Binding Proteins
  • HLA-D Antigens
  • HLA-DM antigens
  • HLA-DP Antigens
  • HLA-DR Antigens
  • HLA-DR alpha-Chains
  • Histocompatibility Antigens Class II
  • Histones
  • MHC class II transactivator protein
  • Nuclear Proteins
  • Regulatory Factor X Transcription Factors
  • Saccharomyces cerevisiae Proteins
  • Trans-Activators
  • Transcription Factors
  • invariant chain
  • Acetyltransferases
  • Histone Acetyltransferases