Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel

J Am Chem Soc. 2002 Mar 20;124(11):2450-1. doi: 10.1021/ja017875d.

Abstract

The structure of a water-insoluble fragment encompassing residues 282-304 of the HIV envelope protein gp41 is studied when solubilized by dihexanoyl phosphatidylcholine (DHPC) and by small bicelles, consisting of a 4:1 molar ratio of DHPC and dimyristoyl phosphatidylcholine (DMPC). Weak alignment with the magnetic field was accomplished in a stretched polyacrylamide gel, permitting measurement of one-bond (1)H-(15)N, (13)Ca-(13)C', and (13)C'-(15)N dipolar couplings, which formed the basis for determining the peptide structure. In both detergent systems, the peptide adopts an alpha-helical conformation from residue 4 through 18. In the presence of the DHPC micelles the helix is strongly curved towards the hydrophobic surface, whereas in the presence of bicelles a much weaker curvature in the opposite direction is observed.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Acrylic Resins / chemistry
  • Dimyristoylphosphatidylcholine / chemistry*
  • HIV Envelope Protein gp41 / chemistry*
  • Micelles*
  • Nuclear Magnetic Resonance, Biomolecular / methods
  • Phospholipid Ethers / chemistry*
  • Protein Conformation
  • Solubility
  • Water / chemistry

Substances

  • 1,2-dihexadecyl-sn-glycero-3-phosphocholine
  • Acrylic Resins
  • HIV Envelope Protein gp41
  • Micelles
  • Phospholipid Ethers
  • polyacrylamide gels
  • Water
  • Dimyristoylphosphatidylcholine