4-Methyl-7-thioumbelliferyl-beta-D-cellobioside: a fluorescent, nonhydrolyzable substrate analogue for cellulases

Biochemistry. 2002 Apr 2;41(13):4447-52. doi: 10.1021/bi015854q.

Abstract

The kinetics of cellulose binding and hydrolysis by cellulases is not well understood except at steady-state conditions. For use in studies of cellulase pre-steady-state and steady-state kinetics, we have prepared 4-methyl-7-thioumbelliferyl-beta-D-cellobioside (MUS-CB), a ground-state nonhydrolyzable analogue of the fluorescent cellulase substrate 4-methylumbelliferyl-beta-D-cellobioside (MU-CB). MUS-CB is not hydrolyzed by the catalytic domain of cellulase E1 from Acidothermus cellulolyticus under conditions where this enzyme rapidly degrades MU-CB. Thermodynamic parameters describing the steady-state binding of MUS-CB to Thermobifida fusca cellulase Cel6A are similar to those for MU-CB, indicating that MUS-CB can be used in place of MU-CB to study binding events in the Cel6A active-site cleft. In the pre-steady-state, MUS-CB binds to Cel6A by a simple, one-step bimolecular association reaction. It is anticipated that similar thio-containing 4-methylumbelliferyl compounds will have applications in studies of other enzyme systems.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Catalytic Domain
  • Cellobiose / analogs & derivatives
  • Cellobiose / chemistry
  • Cellobiose / pharmacology*
  • Cellulase / chemistry*
  • Dose-Response Relationship, Drug
  • Fluorescent Dyes / pharmacology*
  • Glucosides / chemistry*
  • Glycosides / chemistry
  • Hydrolases / chemistry
  • Kinetics
  • Magnetic Resonance Spectroscopy
  • Models, Chemical
  • Protein Binding
  • Thermodynamics
  • Umbelliferones / chemistry
  • Umbelliferones / pharmacology*

Substances

  • 4-methyl-7-thioumbelliferylcellobioside
  • Fluorescent Dyes
  • Glucosides
  • Glycosides
  • Umbelliferones
  • Cellobiose
  • methyl beta-cellobioside
  • Hydrolases
  • Cellulase