Structural investigation of the HIV-1 envelope glycoprotein gp160 cleavage site

Chemistry. 2002 Mar 15;8(6):1467-73. doi: 10.1002/1521-3765(20020315)8:6<1467::aid-chem1467>3.0.co;2-9.

Abstract

The selective proteolytic activation of the HIV-1 envelope glycoprotein gp160 by furin and other precursor convertases (PCs) occurs at the carboxyl side of the sequence Arg508-Glu-Lys-Arg511 (site 1), in spite of the presence of another consensus sequence: Lys500-Ala-Lys-Arg503 (site 2). We report on the solution structural analysis of a 19-residue synthetic peptide, p498, which spans the two gp160-processing sites 1 and 2, and is properly digested by furin at site 1. A molecular model is obtained for p498, by means of molecular dynamics simulations, from NMR data collected in trifluoroethanol/water. The peptide N-terminal side presents a 9-residue helical segment, enclosing the processing site 2; the C-terminal segment can be described as a loop exposing the processing site 1. A hypothesis for the docking of p498 onto the catalytic domain of human furin, modeled by homology and fitting previous site-directed mutagenesis studies, is also presented. p498 site 1 is shown to have easy access to the furin catalytic site, unlike the nonphysiological site 2. Finally, on the basis of available data, we suggest a possible structural motif required for the gp160-PCs recognition.

MeSH terms

  • Amino Acid Sequence
  • Catalytic Domain
  • Consensus Sequence
  • Furin
  • HIV Envelope Protein gp160 / chemistry*
  • HIV Envelope Protein gp160 / metabolism
  • Humans
  • Models, Molecular
  • Peptide Fragments / chemistry*
  • Protein Structure, Secondary
  • Solutions
  • Subtilisins / chemistry*
  • Subtilisins / metabolism

Substances

  • HIV Envelope Protein gp160
  • Peptide Fragments
  • Solutions
  • Subtilisins
  • Furin