Characterization of a bi-directional promoter for divergent transcription of a PHD-zinc finger protein gene and a ran gene in the protozoan pathogen Giardia lamblia

Mol Microbiol. 2002 Feb;43(3):665-76. doi: 10.1046/j.1365-2958.2002.02772.x.

Abstract

We showed previously that transcription of the ran gene in Giardia lamblia is regulated by an AT-rich initiator. In the present study, the ran initiator was found to regulate transcription of a neighbouring PHD zinc-finger protein gene. Deletion and scanning mutagenesis of the phd promoter in a firefly luciferase reporter system showed that the promoter activity is determined by multiple single-stranded T-tract DNA elements distributed into a distal domain spanning the ran initiator (-134/-103) and a proximal domain (-88/-48) spanning phd messenger RNA (mRNA) start sites (-74, -55 and -53 relative to the first ATG). The promoter activity is repressed by the single T-tract element on a non-template strand of the ran initiator, and is activated by closely spaced T-tract elements on the opposite strand. The T-tract elements in the phd and ran initiators compete for similar ssDNA binding proteins. Mutation of -47/-42 resulted in dramatic reduction of luciferase activity without changing luciferase mRNA levels, indicating the potential involvement of a regulatory mechanism in PHD protein translation. These findings suggest that G. lamblia uses multiple copies of a T-tract element as both core and distal elements in regulating transcription initiation, and that expression of the phd gene is regulated at multiple levels.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • DNA, Intergenic
  • DNA, Single-Stranded
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • Gene Expression Regulation
  • Giardia lamblia / genetics*
  • Molecular Sequence Data
  • Mutation
  • Promoter Regions, Genetic
  • Protein Biosynthesis
  • Protozoan Proteins / genetics*
  • Protozoan Proteins / metabolism
  • Transcription, Genetic
  • Zinc Fingers / genetics*
  • ran GTP-Binding Protein / genetics*
  • ran GTP-Binding Protein / metabolism

Substances

  • 5' Untranslated Regions
  • DNA, Intergenic
  • DNA, Single-Stranded
  • DNA-Binding Proteins
  • Phd protein, Giardia lamblia
  • Protozoan Proteins
  • ran GTP-Binding Protein

Associated data

  • GENBANK/AF312377