Xdigitise: visualization of hybridization experiments

Bioinformatics. 2002 May;18(5):757-60. doi: 10.1093/bioinformatics/18.5.757.

Abstract

Xdigitise is a software system for visualization of hybridization experiments giving the user facilities to analyze the corresponding images manually or automatically. Images of the high-density DNA arrays are displayed as well as the results of an external image analysis bundled with Xdigitise, e.g. the spot locations are marked and the duplicate correlations are shown by a color scale.

Availability: Xdigitise can be downloaded from http://www.molgen.mpg.de/~xdigitise.

Publication types

  • Comparative Study

MeSH terms

  • Algorithms
  • DNA Fingerprinting
  • Gene Expression Profiling / methods*
  • Image Interpretation, Computer-Assisted / methods*
  • Information Storage and Retrieval / methods*
  • Models, Statistical
  • Nucleic Acid Hybridization / genetics
  • Oligonucleotide Array Sequence Analysis / methods*
  • Software*