Definition of gene content for nine common group B haplotypes of the Caucasoid population: KIR haplotypes contain between seven and eleven KIR genes

Immunogenetics. 2002 Jul;54(4):221-9. doi: 10.1007/s00251-002-0463-7. Epub 2002 Jun 14.

Abstract

The segregation of killer cell immunoglobulin-like receptor ( KIR) genes was determined for a panel of 21 Caucasoid families: 23 different KIR gene patterns were found and could be assigned to combinations of 16 different haplotypes. Four loci were held in common by all haplotypes: KIR2DL4, KIR3DL2, the putative pseudogene KIR3DL3 and KIR2DL2/KIR2DL3, the latter likely being alleles of one gene. Group A haplotypes, which have a unique combination of seven KIR genes, were found at 80% frequency in the family panel, the polygenic group B haplotypes at 65% frequency. KIR gene segregation was fully determined for the nine group B haplotypes, which occurred at highest frequencies in both the family panel and a panel of unrelated individuals. The group B haplotypes carried between seven and 11 KIR genes and encoded inhibitory KIR for one, two, or all three major HLA class I epitopes. Analysis of human leucocyte antigen (HLA) class I genotypes revealed that most, but not all, individuals possess an inhibitory KIR for a self HLA class I epitope. The number of stimulatory KIR genes in group B haplotypes varied considerably between one and five. The data show that group B haplotypes possess a broad spectrum of KIR gene patterns, which is largely complementary to the KIR gene set of group A haplotypes. The results suggest that rapid diversification of group B haplotypes is the result of pathogen-mediated selection for KIR genotypes that have more than the set of KIR genes provided by the group A haplotype.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Female
  • Gene Frequency
  • Genetic Variation
  • Genotype
  • Haplotypes
  • Histocompatibility Antigens Class I / metabolism
  • Humans
  • Ligands
  • Male
  • Pedigree
  • Polymerase Chain Reaction / methods
  • Receptors, Immunologic / genetics*
  • Receptors, Immunologic / metabolism
  • Receptors, KIR
  • Receptors, KIR2DL2
  • Receptors, KIR2DL3
  • Receptors, KIR2DL4
  • Receptors, KIR3DL2
  • White People / genetics*

Substances

  • Histocompatibility Antigens Class I
  • KIR2DL2 protein, human
  • KIR2DL3 protein, human
  • KIR2DL4 protein, human
  • KIR3DL2 protein, human
  • Ligands
  • Receptors, Immunologic
  • Receptors, KIR
  • Receptors, KIR2DL2
  • Receptors, KIR2DL3
  • Receptors, KIR2DL4
  • Receptors, KIR3DL2