Clostridium phytofermentans sp. nov., a cellulolytic mesophile from forest soil

Int J Syst Evol Microbiol. 2002 Jul;52(Pt 4):1155-1160. doi: 10.1099/00207713-52-4-1155.


An obligately anaerobic, mesophilic, cellulolytic bacterium, strain ISDgT, was isolated from forest soil. Cells of this isolate stained Gram-negative, despite possessing a Gram-positive cell-wall ultrastructure, and were motile, straight rods that formed spherical terminal spores that swelled the sporangium. Cellulose, pectin, polygalacturonic acid, starch, xylan, arabinose, cellobiose, fructose, galactose, gentiobiose, glucose, lactose, maltose, mannose, ribose and xylose supported growth. The major end products of fermentation were ethanol, acetate, CO2 and H2; formate and lactate were minor products. The optimum temperature for growth was 35-37 degrees C. Phylogenetic analyses based on 16S rRNA sequence comparisons showed that strain ISDgT was related to a group of anaerobes that included Clostridium herbivorans, Clostridium polysaccharolyticum and Clostridium populeti. The G+C content of this strain was 35.9 mol%. On the basis of numerous genotypic and phenotypic differences between strain ISDgT and its close relatives, strain ISDgT is proposed as a novel species in the genus Clostridium, for which the name Clostridium phytofermentans sp. nov. is proposed. The type strain is ISDgT (= ATCC 700394T).

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacterial Typing Techniques
  • Cellulose / metabolism*
  • Clostridium / classification*
  • Clostridium / genetics
  • Clostridium / metabolism
  • Clostridium / physiology
  • DNA, Ribosomal / analysis
  • Ethanol / metabolism
  • Fermentation
  • Genotype
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Trees*


  • DNA, Ribosomal
  • RNA, Ribosomal, 16S
  • Ethanol
  • Cellulose

Associated data

  • GENBANK/AF020431