3-Methyladenine DNA glycosylase I is an unexpected helix-hairpin-helix superfamily member

Nat Struct Biol. 2002 Sep;9(9):659-64. doi: 10.1038/nsb829.

Abstract

The Escherichia coli enzyme 3-methyladenine DNA glycosylase I (TAG) hydrolyzes the glycosidic bond of 3-methyladenine (3-MeA) in DNA and is found in many bacteria and some higher eukaryotes. TAG shows little primary sequence identity with members of the well-known helix-hairpin-helix (HhH) superfamily of DNA repair glycosylases, which consists of AlkA, EndoIII, MutY and hOGG1. Unexpectedly, the three-dimensional solution structure reported here reveals TAG as member of this superfamily. The restricted specificity of TAG for 3-MeA bases probably arises from its unique aromatic rich 3-MeA binding pocket and the absence of a catalytic aspartate that is present in all other HhH family members.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • DNA Glycosylases*
  • Models, Molecular
  • Molecular Sequence Data
  • N-Glycosyl Hydrolases / chemistry*
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Conformation
  • Sequence Homology, Amino Acid
  • Spectrometry, Fluorescence

Substances

  • 3-methyladenine-DNA glycosylase
  • DNA Glycosylases
  • N-Glycosyl Hydrolases

Associated data

  • PDB/1LMZ