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. 2002 Sep;18(9):1276-7.
doi: 10.1093/bioinformatics/18.9.1276.

PeCoP: Automatic Determination of Persistently Conserved Positions in Protein Families

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PeCoP: Automatic Determination of Persistently Conserved Positions in Protein Families

Iddo Friedberg et al. Bioinformatics. .

Abstract

PeCoP is a WWW-based service which accepts a protein sequence, and reports positions that are conserved in close and distant sequence family members. The collation of family members is performed using iterative PSI-BLAST runs. Examining positional conservation in close and distant family members enables a better selection of positions that may play a role in determining the protein's structure and function.

Availability: http://bioinformatics.org/pecop

Contact: idoerg@burnham.org

Supplementary information: http://bioinformatics.org/pecop/about_pecop

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