Preparation of a crystallizable mRNA-binding fragment of Moorella thermoacetica elongation factor SelB

Acta Crystallogr D Biol Crystallogr. 2002 Oct;58(Pt 10 Pt 2):1871-3. doi: 10.1107/s090744490201380x. Epub 2002 Sep 28.

Abstract

SelB is a bacterial elongation factor required for the decoding of a UGA stop codon together with a specific mRNA hairpin to selenocysteine. In attempts to crystallize Moorella thermoacetica SelB, a proteolysis process occurred and crystals of a proteolytic fragment were observed. The crystals, which appeared after a year, contained a C-terminal 30 kDa fragment containing the mRNA-binding domain. This fragment was reproduced through recloning. Crystals diffracting to 2.7 A were obtained.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacteria / chemistry*
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / isolation & purification
  • Base Sequence
  • Binding Sites
  • Cloning, Molecular
  • Crystallography, X-Ray
  • DNA Primers
  • Nucleic Acid Conformation
  • Peptide Elongation Factors / chemistry*
  • Peptide Elongation Factors / genetics
  • Peptide Elongation Factors / isolation & purification
  • Peptide Fragments / chemistry
  • Peptide Fragments / isolation & purification
  • RNA, Messenger / chemistry
  • RNA, Messenger / genetics
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / isolation & purification

Substances

  • Bacterial Proteins
  • DNA Primers
  • Peptide Elongation Factors
  • Peptide Fragments
  • RNA, Messenger
  • Recombinant Proteins
  • SelB protein, Bacteria

Associated data

  • PDB/1LVA
  • PDB/R1LVASF