PRINTS and its automatic supplement, prePRINTS

Nucleic Acids Res. 2003 Jan 1;31(1):400-2. doi: 10.1093/nar/gkg030.


The PRINTS database houses a collection of protein fingerprints. These may be used to assign uncharacterised sequences to known families and hence to infer tentative functions. The September 2002 release (version 36.0) includes 1800 fingerprints, encoding approximately 11 000 motifs, covering a range of globular and membrane proteins, modular polypeptides and so on. In addition to its continued steady growth, we report here the development of an automatic supplement, prePRINTS, designed to increase the coverage of the resource and reduce some of the manual burdens inherent in its maintenance. The databases are accessible for interrogation and searching at

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs*
  • Animals
  • Automation
  • Conserved Sequence
  • Databases, Protein*
  • Proteins / chemistry*
  • Software


  • Proteins