Isolation and characterization of 27-O-demethylrifamycin SV methyltransferase provides new insights into the post-PKS modification steps during the biosynthesis of the antitubercular drug rifamycin B by Amycolatopsis mediterranei S699

Arch Biochem Biophys. 2003 Mar 15;411(2):277-88. doi: 10.1016/s0003-9861(03)00004-3.

Abstract

The gene rif orf14 in the rifamycin biosynthetic gene cluster of Amycolatopsis mediterranei S699, producer of the antitubercular drug rifamycin B, encodes a protein of 272 amino acids identified as an AdoMet: 27-O-demethylrifamycin SV methyltransferase. Frameshift inactivation of rif orf14 generated a mutant of A. mediterranei S699 that produces no rifamycin B, but accumulates 27-O-demethylrifamycin SV (DMRSV) as the major new metabolite, together with a small quantity of 27-O-demethyl-25-O-desacetylrifamycin SV (DMDARSV). Heterologous expression of rif orf14 in Escherichia coli yielded a 33.8-kDa polyhistidine-tagged polypeptide, which efficiently catalyzes the methylation of DMRSV to rifamycin SV, but not that of DMDARSV or rifamycin W. 27-O-Demethylrifamycin S was methylated poorly, if at all, by the enzyme to produce rifamycin S. The purified enzyme does not require a divalent cation for catalytic activity. While Ca(2+) or Mg(2+) inhibits the enzyme activity slightly, Zn(2+), Ni(2+), and Co(2+) are strongly inhibitory. The K(m) values for DMRSV and S-adenosyl-L-methionine (AdoMet) are 18.0 and 19.3 microM, respectively, and the K(cat) is 87s(-1). The results indicate that DMRSV is a direct precursor of rifamycin SV and that acetylation of the C-25 hydroxyl group must precede the methylation reaction. They also suggest that rifamycin S is not the precursor of rifamycin SV in rifamycin B biosynthesis, but rather an oxidative shunt-product.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Actinomycetales / metabolism*
  • Amino Acid Sequence
  • Antibiotics, Antitubercular / biosynthesis*
  • Gene Expression Regulation
  • Gene Silencing
  • Methyltransferases / genetics*
  • Methyltransferases / metabolism*
  • Molecular Sequence Data
  • Molecular Structure
  • Multienzyme Complexes / metabolism*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Rifamycins / biosynthesis*
  • Rifamycins / chemistry
  • Rifamycins / metabolism
  • S-Adenosylmethionine / metabolism
  • Sequence Homology, Amino Acid
  • Substrate Specificity

Substances

  • 27-O-demethylrifamycin S
  • 27-O-demethylrifamycin SV
  • Antibiotics, Antitubercular
  • Multienzyme Complexes
  • Recombinant Proteins
  • Rifamycins
  • S-Adenosylmethionine
  • rifamycin B
  • 27-O-demethylrifamycin SV methyltransferase
  • Methyltransferases