Anoxynatronum sibiricum gen.nov., sp.nov. alkaliphilic saccharolytic anaerobe from cellulolytic community of Nizhnee Beloe (Transbaikal region)

Extremophiles. 2003 Jun;7(3):213-20. doi: 10.1007/s00792-002-0312-5. Epub 2003 Feb 19.

Abstract

New alkaliphilic anaerobic fermentative bacteria, strains Z-7981 and Z-7981', with Gram-positive cell walls, were isolated from the cellulolytic community from the soda lake Nizhnee Beloye, south-east of Baikal. Cells were motile rods, which differed in dimensions but, according to 98% DNA/DNA homology, belonged to the same species. Strain Z-7981 was chosen as the type and studied in detail. It did not produce spores and its cells were non-thermoresistant. It was a true alkaliphile with a growth range from pH 7.1 to pH 10.1 and optimal pH for growth at pH 9.1. It was obligately dependent on Na(+) and carbonate ions but not on Cl(-). Growth occurred in media with total sodium content from 0.076 M to 1.27 M Na(+ )with a broad optimum from 0.25 to 0.86 M Na(+). Growth showed an optimum at 35 degrees C, with absence of growth above 46 degrees C. The organism was aerotolerant and was capable of fermentation in non-reducing medium at less than 4.75% O(2) in the gas phase. Strain Z-7981 fermented mono- and disaccharides, sugar alcohols, but only glutamate and cysteine among the amino acids, and the proteinaceous substrates, chitin and dried Spirulina biomass. Fermentation products were acetate and ethanol. Fe(3+) was reduced in a process that yielded no energy. Phylogenetically the new organism belonged to cluster XI of the Gram-positive bacteria with low G+C content and its closest neighboring taxon was Tindallia magadiensis. However, according to its phenotypic and genotypic characters it did not belong to any known genus from this group. We suggest a new genus and species with the name Anoxynatronum sibiricum and strain Z-7981 as its type (=DSM15060).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteria, Anaerobic / classification*
  • Bacteria, Anaerobic / genetics*
  • Carbohydrate Metabolism
  • Cellulose / chemistry
  • Culture Media / pharmacology
  • DNA / ultrastructure
  • DNA, Ribosomal / genetics*
  • Fermentation
  • Genotype
  • Hydrogen-Ion Concentration
  • Ions
  • Iron / chemistry
  • Models, Chemical
  • Phenotype
  • Phylogeny
  • Protein Binding
  • RNA, Ribosomal, 16S / metabolism
  • Sodium / chemistry
  • Sodium / pharmacology
  • Substrate Specificity
  • Temperature

Substances

  • Culture Media
  • DNA, Ribosomal
  • Ions
  • RNA, Ribosomal, 16S
  • Cellulose
  • DNA
  • Sodium
  • Iron