Vienna RNA secondary structure server

Nucleic Acids Res. 2003 Jul 1;31(13):3429-31. doi: 10.1093/nar/gkg599.


The Vienna RNA secondary structure server provides a web interface to the most frequently used functions of the Vienna RNA software package for the analysis of RNA secondary structures. It currently offers prediction of secondary structure from a single sequence, prediction of the consensus secondary structure for a set of aligned sequences and the design of sequences that will fold into a predefined structure. All three services can be accessed via the Vienna RNA web server at

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Computer Graphics
  • Internet
  • Nucleic Acid Conformation
  • RNA / chemistry*
  • Sequence Alignment
  • Sequence Analysis, RNA / methods*
  • Software*


  • RNA