Solution structure of the human Grb7-SH2 domain/erbB2 peptide complex and structural basis for Grb7 binding to ErbB2

J Biomol NMR. 2003 Nov;27(3):205-19. doi: 10.1023/a:1025498409113.

Abstract

The solution structure of the hGrb7-SH2 domain in complex with a ten amino acid phosphorylated peptide ligand representative of the erbB2 receptor tyrosine kinase (pY1139) is presented as determined by nuclear magnetic resonance methods. The hGrb7-SH2 domain structure reveals the Src homology 2 domain topology consisting of a central beta-sheet capped at each end by an alpha-helix. The presence of a four residue insertion in the region between beta-strand E and the EF loop and resulting influences on the SH2 domain/peptide complex structure are discussed. The binding conformation of the erbB2 peptide is in a beta-turn similar to that found in phosphorylated tyrosine peptides bound to the Grb2-SH2 domain. To our knowledge this is only the second example of an SH2 domain binding its naturally occurring ligands in a turn, instead of extended, conformation. Close contacts between residues responsible for binding specificity in hGrb7-SH2 and the erbB2 peptide are characterized and the potential effect of mutation of these residues on the hGrb7-SH2 domain structure is discussed.

MeSH terms

  • Amino Acids / chemistry
  • Binding Sites
  • Dimerization
  • GRB7 Adaptor Protein
  • Genes, erbB-2 / physiology*
  • Humans
  • Hydrogen Bonding
  • Ligands
  • Nuclear Magnetic Resonance, Biomolecular / methods
  • Protein Binding
  • Protein Conformation
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Proteins / chemistry*
  • Proteins / metabolism
  • Solutions
  • Substrate Specificity
  • src Homology Domains

Substances

  • Amino Acids
  • GRB7 protein, human
  • Ligands
  • Proteins
  • Solutions
  • GRB7 Adaptor Protein

Associated data

  • PDB/1MW4