A DNA polymerase beta mutant from colon cancer cells induces mutations

Proc Natl Acad Sci U S A. 2004 Apr 20;101(16):6074-9. doi: 10.1073/pnas.0308571101. Epub 2004 Apr 9.


Previous investigations have shown that approximately 35% of the 90 tumors analyzed to date contain mutations within the DNA polymerasebeta (pol beta) gene. The existence of pol beta mutations in a substantial fraction of human tumors studied suggests a link between DNA pol beta and cancer. A DNA pol beta variant, in which Lys-289 has been altered to Met, was identified previously in a colorectal carcinoma. The K289M protein was expressed in mouse L cells containing the lambda cII mutational target. The lambda DNA was packaged and used to infect bacterial cells to obtain the spontaneous mutation frequency. We found that expression of K289M in the mouse cells resulted in a 2.5-fold increase in the mutation frequency. What was most interesting was that expression of K289M in these cells resulted in a 16-fold increase in the frequency of C to G or G to C base substitutions at a specific site within the cII target. By using this cII target sequence, kinetic analysis of the purified K289M protein revealed that it was able to misincorporate dCTP opposite template C and dGTP opposite template G with significantly higher efficiency than the wild-type pol beta protein. We provide evidence that misincorporation of nucleotides by K289M results from altered positioning of the DNA within the active site of the enzyme. Our data are consistent with the interpretation that misincorporation of nucleotides resulting from altered DNA positioning by the K289M protein has the potential to result in tumorigenesis or neoplastic progression.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • Colonic Neoplasms / enzymology
  • Colonic Neoplasms / genetics*
  • DNA Polymerase beta / genetics
  • DNA Polymerase beta / isolation & purification*
  • DNA Polymerase beta / physiology
  • DNA Primers
  • Molecular Sequence Data
  • Mutagenesis
  • Reverse Transcriptase Polymerase Chain Reaction
  • Transcription, Genetic / physiology*


  • DNA Primers
  • DNA Polymerase beta