A System for Automated Bacterial (genome) Integrated Annotation--SABIA

Luiz G P Almeida; Roger Paixão; Rangel C Souza; Gisele C da Costa; Frank J A Barrientos; M Trindade dos Santos; Darcy F de Almeida; Ana Tereza R Vasconcelos

doi:10.1093/bioinformatics/bth273

A System for Automated Bacterial (genome) Integrated Annotation--SABIA

Bioinformatics. 2004 Nov 1;20(16):2832-3. doi: 10.1093/bioinformatics/bth273. Epub 2004 Apr 15.

Authors

Luiz G P Almeida¹, Roger Paixão, Rangel C Souza, Gisele C da Costa, Frank J A Barrientos, M Trindade dos Santos, Darcy F de Almeida, Ana Tereza R Vasconcelos

Affiliation

¹ Laboratório Nacional de Computação Científica LNCC/MCT, Rua Getúlio Vargas 333, Quitandinha, Petrópolis, RJ, 25651-070, Brazil.

PMID: 15087310
DOI: 10.1093/bioinformatics/bth273

Abstract

A web-based software suite, SABIA (System for Automated Bacterial Integrated Annotation), is described that provides a comprehensive computational support for the assembly and annotation of whole bacterial genomes from the data derived from sequencing projects.

Availability: Both SABIA and supplementary materials are available at http://www.sabia.lncc.br

MeSH terms

Algorithms*
Chromosome Mapping / methods*
Databases, Genetic*
Documentation / methods*
Genome, Bacterial*
Sequence Alignment / methods
Sequence Analysis, DNA / methods*
Software*
User-Computer Interface