Diffusion of actin filaments within a thin layer between two walls

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Jun;69(6 Pt 1):061921. doi: 10.1103/PhysRevE.69.061921. Epub 2004 Jun 23.

Abstract

Diffusion of the protein filaments F -actin confined in a thin layer between two walls is studied using the methods of single filament fluorescence imaging and particle tracking. The translational and rotational diffusion coefficients are measured for F -actin of lengths in the range of 1.5-5 microm. The length dependence of the measured diffusion coefficients is consistent with the predicted two-dimensional projection of the diffusion of a cylinder in an unbounded fluid. Fits based on the formulas for diffusion in the bulk fluid yield higher apparent viscosity values than that of the buffer solution by a factor of 2 for a layer thickness between 0.7 and 1.6 microm. We show that the measured results can be accounted for by correction based on the hydrodynamic theory of a long cylinder between confining walls.

Publication types

  • Comparative Study
  • Evaluation Study
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.
  • Validation Study

MeSH terms

  • Actins / chemistry*
  • Actins / ultrastructure*
  • Computer Simulation
  • Diffusion
  • Microfluidics / methods*
  • Models, Chemical*
  • Motion
  • Solutions

Substances

  • Actins
  • Solutions