Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the epsilon-Proteobacteria isolated from Okinawa Trough hydrothermal sediments

Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1477-1482. doi: 10.1099/ijs.0.03042-0.

Abstract

A novel mesophilic sulfur- and thiosulfate-oxidizing bacterium, strain 42BKTT, was isolated from the gas-bubbling sediment at the Iheya North hydrothermal system in the mid-Okinawa Trough, Japan. The isolate was a Gram-negative, non-motile and coccoid to oval-shaped bacterium. Growth was observed at 10-40 degrees C (optimum 28-30 degrees C) and in the pH range 5.0-9.0 (optimum 6.5-7.0). Strain 42BKTT grew chemolithoautotrophically with elemental sulfur or thiosulfate as a sole electron donor and oxygen (optimum 5 % in gas phase) or nitrate as an electron acceptor. The G + C content of the genomic DNA was 48.0 mol%. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that the isolate belonged to the previously uncultivated Group F within the epsilon-Proteobacteria, which includes phylotypes of vent epibiont and environmental sequences from global deep-sea cold seep and hydrothermal vent fields. On the basis of the physiological and molecular characteristics of this isolate, the type species of a novel genus, Sulfurovum lithotrophicum gen. nov., sp. nov., is proposed. The type strain is 42BKTT (= ATCC BAA-797T = JCM 12117T).

MeSH terms

  • Base Composition
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Epsilonproteobacteria / classification*
  • Epsilonproteobacteria / isolation & purification*
  • Epsilonproteobacteria / physiology
  • Epsilonproteobacteria / ultrastructure
  • Genes, rRNA / genetics
  • Geologic Sediments / microbiology*
  • Gram-Negative Bacteria / classification
  • Gram-Negative Bacteria / isolation & purification
  • Gram-Negative Bacteria / physiology
  • Gram-Negative Bacteria / ultrastructure
  • Hydrogen-Ion Concentration
  • Japan
  • Molecular Sequence Data
  • Nitrates / metabolism
  • Oxidation-Reduction
  • Oxygen / metabolism
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sulfur / metabolism*
  • Temperature
  • Thiosulfates / metabolism
  • Water Microbiology

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Nitrates
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Thiosulfates
  • Sulfur
  • Oxygen

Associated data

  • GENBANK/AB091292