In vitro biochemical and thermodynamic characterization of nucleocapsid protein of SARS

Biophys Chem. 2004 Dec 1;112(1):15-25. doi: 10.1016/j.bpc.2004.06.008.

Abstract

The major biochemical and thermodynamic features of nucelocapsid protein of SARS coronavirus (SARS_NP) were characterized by use of non-denatured gel electrophoresis, size-exclusion chromatographic and surface plasmon resonance (SPR) techniques. The results showed that SARS_NP existed in vitro as oligomer, more probably dimer, as the basic functional unit. This protein shows its maximum conformational stability near pH 9.0, and it seems that its oligomer dissociation and protein unfolding occur simultaneously. Thermal-induced unfolding for SARS_NP was totally irreversible. Both the thermal and chemical denaturant-induced denaturation analyses showed that oligomeric SARS_NP unfolds and refolds through a two-state model, and the electrostatic interactions among the charge groups of SARS_NP made a significant contribution to its conformational stability.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromatography, Gel
  • Circular Dichroism
  • Coronavirus Nucleocapsid Proteins
  • Dimerization
  • Guanidine / metabolism
  • Hot Temperature
  • In Vitro Techniques
  • Nucleocapsid Proteins / chemistry
  • Nucleocapsid Proteins / metabolism*
  • Protein Conformation*
  • Protein Denaturation
  • Protein Folding*
  • Surface Plasmon Resonance
  • Thermodynamics

Substances

  • Coronavirus Nucleocapsid Proteins
  • Nucleocapsid Proteins
  • Guanidine