Comparative genomics in hemiascomycete yeasts: evolution of sex, silencing, and subtelomeres

Mol Biol Evol. 2005 Apr;22(4):856-73. doi: 10.1093/molbev/msi070. Epub 2004 Dec 22.


The recent release of sequences of several unexplored yeast species that cover an evolutionary range comparable to the entire phylum of chordates offers us a unique opportunity to investigate how genes involved in adaptation have been shaped by evolution. We have examined how three different sets of genes, all related to adaptative processes at the genomic level, have evolved in hemiascomycetes: (1) the mating-type genes that govern sexuality, (2) the silencing genes that are connected to regulation of mating-type cassettes and to telomere position effect, and (3) the gene families found repeated in subtelomeric regions. We report new combinations of mating-type genes and cassettes in hemiascomycetous species; we show that silencing proteins diverge rapidly. We have also found that in all species studied, subtelomeric gene families exist and are specific to each species.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Ascomycota / genetics*
  • Ascomycota / physiology
  • Base Sequence
  • DNA, Fungal
  • Evolution, Molecular*
  • Gene Silencing*
  • Genomics*
  • Molecular Sequence Data
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Telomere*


  • DNA, Fungal