Generation of a strong promoter for Escherichia coli from eukaryotic genome DNA

J Biotechnol. 2005 Feb 9;115(3):239-48. doi: 10.1016/j.jbiotec.2004.08.015.

Abstract

Improvement of a gene product by introducing mutations into the gene is usually applied for improving structural genes. In this study the procedure was applied for generation and improvement of a genetic signal to drive gene expression. By adding various concentrations of Mn2+ to the PCR reaction mixture, mutations were introduced into a DNA fragment at various ratios. An appropriate condition was employed to introduce mutations into a DNA fragment with no promoter activity. The mutated fragment was introduced at an upstream site of the lacZ gene in a plasmid vector to see if the fragment carries promoter activity. Lysate of an Escherichia coli transformant with the vector was assayed for beta-galactosidase expression as an indicator of the promoter activity. Mutated DNA fragments were generated by error prone PCR with a condition which leads to introduction of 1.5% of mutation into a DNA fragment during the process. The strongest promoter was chosen by beta-galactosidase assay after error prone PCR and subjected to another step of the PCR. These processes were repeated four times to improve its activity to 1.94-fold to that by the tac promoter. When the luciferase gene was expressed by the strongest promoters, a similar expression level was noted. These results indicate that by randomly introducing mutations into a DNA fragment, it is relatively easy to generate and improve a prokaryotic promoter.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cloning, Molecular / methods
  • DNA, Bacterial / genetics
  • Escherichia coli / genetics*
  • Escherichia coli / metabolism
  • Escherichia coli Proteins / biosynthesis*
  • Escherichia coli Proteins / genetics*
  • Evolution, Molecular
  • Genetic Enhancement / methods
  • HeLa Cells
  • Humans
  • Mutagenesis, Site-Directed / genetics
  • Polymerase Chain Reaction / methods*
  • Promoter Regions, Genetic / genetics*
  • Protein Engineering / methods*
  • Recombinant Proteins / biosynthesis*

Substances

  • DNA, Bacterial
  • Escherichia coli Proteins
  • Recombinant Proteins