The axial channel of the 20S proteasome opens upon binding of the PA200 activator

J Mol Biol. 2005 Mar 11;346(5):1221-7. doi: 10.1016/j.jmb.2004.12.049. Epub 2005 Jan 26.


Proteasomes consist of a proteolytic core called the 20 S particle and ancillary factors that regulate its activity in various ways. PA200 has been identified as a large (200 kDa) nuclear protein that stimulates proteasomal hydrolysis of peptides. To characterize its interaction with the 20 S core, we have visualized PA200-20 S complexes by electron microscopy. Monomers of PA200 bind to one or both ends of the 20 S core. Reconstructed in three dimensions to 23 A resolution from cryo-electron micrographs of the singly bound complex, PA200 has an asymmetric dome-like structure with major and minor lobes. Taking into account previous bioinformatic analysis, it is likely to represent an irregular folding of an alpha-helical solenoid composed of HEAT-like repeats. PA200 makes contact with all alpha-subunits except alpha7, and this interaction induces an opening of the axial channel through the alpha-ring. Thus, the activation mechanism of PA200 is expressed via its allosteric effects on the 20 S core particle, perhaps facilitating release of digestion products or the entrance of substrates.

MeSH terms

  • Allosteric Site*
  • Catalytic Domain
  • Ion Channels / chemistry
  • Ion Channels / metabolism*
  • Ion Channels / ultrastructure
  • Proteasome Endopeptidase Complex / chemistry
  • Proteasome Endopeptidase Complex / metabolism*
  • Proteasome Endopeptidase Complex / ultrastructure
  • Protein Binding
  • Protein Conformation
  • Protein Folding
  • Repetitive Sequences, Amino Acid / physiology*


  • Ion Channels
  • Proteasome Endopeptidase Complex