Purification and characterization of a lyase from the EDTA-degrading bacterial strain DSM 9103 that catalyzes the splitting of [S,S]-ethylenediaminedisuccinate, a structural isomer of EDTA

Biodegradation. 1997;8(6):419-28. doi: 10.1023/a:1008267931018.

Abstract

The bacterial strain DSM 9103, able to utilize EDTA as a sole source of carbon, nitrogen, and energy, is also capable to grow with [S,S]-ethylenediaminedisuccinate ([S,S]-EDDS), a structural isomer of EDTA. In cell-free extracts of [S,S]-EDDS-grown bacteria, [S,S]-EDDS degradation was observed in the absence of any cofactors. An enzyme was purified 41-fold that catalyzed the non-hydrolytic splitting of [S,S]-EDDS leading to the formation of fumarate and N-(2-aminoethyl) aspartic acid. These data strongly suggest that the enzyme belongs to the group of carbon-nitrogen lyases. The splitting reaction was reversible, and an equilibrium constant of approximately 43.0 10(-1) M was determined. Out of the three stereo-isomers of EDDS, [S,S]- and [R,S]-EDDS were accepted as substrates by the lyase, whereas [R,R]-EDDS remained unchanged in assays with both cell-free extracts and pure enzyme. The enzyme catalyzed the transformation of free [S,S]-EDDS and of [S,S]-EDDS-metal complexes with stability constant lower than 10, namely of MgEDDS, CaEDDS, BaEDDS and to a small extent also of MnEDDS; FeIIIEDDS, NiEDDS, CuEDDS, CoEDDS and ZnEDDS were not transformed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteria / enzymology*
  • Bacteria / metabolism*
  • Bacterial Proteins / metabolism
  • Biodegradation, Environmental
  • Chelating Agents / metabolism*
  • Chromatography, Gel
  • Edetic Acid / metabolism*
  • Electrophoresis, Polyacrylamide Gel
  • Ethylenediamines / metabolism*
  • Isomerism
  • Lyases / chemistry*
  • Lyases / isolation & purification
  • Proteobacteria / enzymology
  • Proteobacteria / metabolism*
  • Succinates / metabolism*

Substances

  • (S,S)-ethylenediaminedisuccinate
  • Bacterial Proteins
  • Chelating Agents
  • Ethylenediamines
  • Succinates
  • Edetic Acid
  • Lyases