Evidence of the etiological predominance of norovirus in gastroenteritis outbreaks--emerging new-variant and recombinant noroviruses in Hungary

J Med Virol. 2005 Aug;76(4):598-607. doi: 10.1002/jmv.20403.

Abstract

Between January 2001 and December 2003, stool specimens from 262 (45%) of 581 reported outbreaks of gastroenteritis were investigated for noroviruses in Hungary. Specimens collected from outbreaks of non-bacterial gastroenteritis were examined by reverse-transcription polymerase chain reaction and enzyme immunoassay. In 253 (97%) of 262 outbreaks, norovirus was detected and confirmed by sequencing in 211 (81%). Hospitals (35%), day care centers (30%), and elderly homes (27%) were the most common settings. Diversity and frequency of the genotypes changed over time but with predominance (95%) of genogroup (GG) II strains. Strains grouped into 11 genotypes including an epidemic spread of new-variant GGII4 (Lordsdale virus) and a recently emerged group of natural recombinant strains (GGIIb/Hilversum polymerase) with four capsid types (Hawaii, Mexico, Snow Mountain, and Lordsdale). Clusters of epidemics including food-borne outbreaks were detected. According to this study, noroviruses are the predominant etiological agents causing gastroenteritis outbreaks in Hungary.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Caliciviridae Infections / epidemiology
  • Caliciviridae Infections / virology*
  • Capsid
  • Community-Acquired Infections / epidemiology
  • Community-Acquired Infections / virology
  • Cross Infection / epidemiology
  • Cross Infection / virology
  • Disease Outbreaks*
  • Enzyme-Linked Immunosorbent Assay
  • Feces / virology
  • Gastroenteritis / epidemiology*
  • Gastroenteritis / virology*
  • Genotype
  • Humans
  • Hungary / epidemiology
  • Molecular Sequence Data
  • Norovirus / classification*
  • Norovirus / genetics
  • Norovirus / isolation & purification*
  • Phylogeny
  • Prevalence
  • RNA, Viral / genetics
  • Recombination, Genetic
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Homology

Substances

  • RNA, Viral

Associated data

  • GENBANK/AY672543
  • GENBANK/AY672544
  • GENBANK/AY672545
  • GENBANK/AY672546
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