Molecular and clinical epidemiology of CXCR4-using HIV-1 in a large population of antiretroviral-naive individuals

J Infect Dis. 2005 Aug 1;192(3):466-74. doi: 10.1086/431519. Epub 2005 Jun 23.

Abstract

Objective: We wished to characterize the epidemiological and clinical correlates of CXCR4-using human immunodeficiency virus type 1 (HIV-1) ("X4 variants") in a cross-sectional analysis of a large population of antiretroviral-naive individuals.

Methods: HIV-1 coreceptor use was determined in the last pretherapy plasma sample for 1191 individuals initiating triple-combination therapy in British Columbia, Canada. Baseline variables investigated included sociodemographic characteristics, plasma viral load (pVL), CD4 cell count, AIDS diagnosis, HIV-1 V3 loop sequence, and human CCR5 Delta 32 genotype.

Results: Individuals harboring X4 variants (n = 178 of 979 phenotyped samples; 18.2%) displayed a poorer baseline clinical profile than individuals harboring exclusively CCR5-using HIV-1 ("R5 variants") (median pVL, 175,000 vs. 120,000 copies of HIV-1 RNA/mL [P = .0006]; median CD4 cell count, 110 vs. 290 cells/mm(3) [P < .0001]). Individuals heterozygous for the CCR5 Delta 32 deletion (n = 128 of 967; 13.2%) were at 2.5 times higher risk of harboring X4 variants, compared with those without the deletion (multivariate P = .0005). The presence of basic amino acids at codon 11 and/or codon 25 of HIV-1 V3 (n = 109 of 955; 11.4%) was associated with a 9.1 times higher risk of harboring X4 variants (multivariate P < .0001), regardless of CCR5 Delta 32 genotype. In multivariate analyses adjusting for baseline parameters, HIV-1 coreceptor use was not found to be a significant predictor of survival or treatment response.

Conclusion: Baseline CD4 cell count, pVL, HIV-1 V3 sequence, and CCR5 Delta 32 genotype were the strongest determinants of CXCR4-using HIV-1 in this population. After adjustment for baseline parameters, the presence of X4 variants before initiation of highly active antiretroviral therapy was not independently associated with a poorer outcome of therapy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Analysis of Variance
  • Anti-HIV Agents / therapeutic use
  • British Columbia
  • CD4 Lymphocyte Count
  • Female
  • Genetic Variation
  • Genotype
  • HIV Infections / drug therapy
  • HIV Infections / immunology
  • HIV Infections / prevention & control
  • HIV-1 / genetics*
  • Humans
  • Male
  • Middle Aged
  • Molecular Epidemiology / methods*
  • Multivariate Analysis
  • Phenotype
  • Receptors, CXCR4 / genetics*
  • Treatment Outcome

Substances

  • Anti-HIV Agents
  • Receptors, CXCR4