Loss and gain of chromosome 5 controls growth of Candida albicans on sorbose due to dispersed redundant negative regulators

Proc Natl Acad Sci U S A. 2005 Aug 23;102(34):12147-52. doi: 10.1073/pnas.0505625102. Epub 2005 Aug 11.

Abstract

A reversible decrease or increase of Candida albicans chromosome copy number was found to be a prevalent means of survival of this opportunistic pathogen, under conditions that kill cells or inhibit their propagation. The utilization of a secondary carbon source, l-sorbose, by reversible loss of chromosome 5, serves as a model system. We have determined that an approximately 209-kbp portion of the right arm of chromosome 5 contains at least five spatially separated, functionally redundant regions that control utilization of l-sorbose. The regions bear no structural similarity among themselves, and four of them contain sequences that bear no similarity with any known sequence. We identified a regulatory gene in region A that encodes a helix-loop-helix protein. Most important, the multiple redundant regulators scattered along chromosome 5 explain, in a simple, elegant way, why the loss of the entire homologue is usually required for growth on sorbose. Thus, an entire chromosome acts as a single regulatory unit, a feature not previously considered. Our finding appears to be a paradigm for the control of other phenotypes in C. albicans that also depend on chromosome loss, thus implying that C. albicans genes are not distributed randomly among different chromosomes.

Publication types

  • Comparative Study
  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Candida albicans / genetics*
  • Candida albicans / growth & development*
  • Candida albicans / metabolism
  • Chromosome Deletion*
  • Chromosomes, Fungal / genetics*
  • Colony Count, Microbial
  • Computational Biology
  • DNA Primers
  • Electrophoresis, Gel, Pulsed-Field
  • Genes, Fungal / genetics*
  • Genes, Regulator / genetics*
  • Helix-Loop-Helix Motifs / genetics
  • Molecular Sequence Data
  • Open Reading Frames / genetics
  • Sorbose / metabolism*

Substances

  • DNA Primers
  • Sorbose

Associated data

  • GENBANK/DQ068774