Aeromicrobium alkaliterrae sp. nov., isolated from an alkaline soil, and emended description of the genus Aeromicrobium

Int J Syst Evol Microbiol. 2005 Sep;55(Pt 5):2171-2175. doi: 10.1099/ijs.0.63582-0.

Abstract

A Gram-positive, aerobic, non-motile bacterial strain, KSL-107(T), was isolated from an alkaline soil from Korea and subjected to a polyphasic taxonomic study. Strain KSL-107(T) grew optimally at 25 degrees C and pH 7.0-7.5. Strain KSL-107(T) had a cell-wall peptidoglycan based on ll-2,6-diaminopimelic acid. It contained MK-9(H(4)) as the predominant menaquinone and C(16:0), C(16:0) 2-OH and 10-methyl C(18:0) as the major fatty acids. The DNA G+C content was 71.5 mol%. Comparative 16S rRNA gene sequence analyses showed that strain KSL-107(T) was phylogenetically affiliated to the genus Aeromicrobium of the family Nocardioidaceae. Similarity values between the 16S rRNA gene sequence of strain KSL-107(T) and those of type strains of Aeromicrobium species were in the range 97.9-98.2%. The isolate could be distinguished from other Aeromicrobium species by levels of DNA-DNA relatedness and differences in some phenotypic characteristics. On the basis of the data presented, it is suggested that strain KSL-107(T) (=KCTC 19073(T)=DSM 16824(T)) represents a novel Aeromicrobium species, for which the name Aeromicrobium alkaliterrae sp. nov. is proposed. An emended description of the genus Aeromicrobium is also proposed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / chemistry
  • Actinomycetales / classification*
  • Actinomycetales / genetics
  • Actinomycetales / isolation & purification
  • DNA, Bacterial / analysis
  • DNA, Ribosomal / analysis
  • Genes, rRNA
  • Hydrogen-Ion Concentration
  • Korea
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AY822044