Epidemic spread of recombinant noroviruses with four capsid types in Hungary

J Clin Virol. 2006 Jan;35(1):84-8. doi: 10.1016/j.jcv.2005.07.012. Epub 2005 Oct 19.

Abstract

Background: Noroviruses are common pathogens in gastro-enteritis outbreaks in humans worldwide. Noroviruses are genetically diverse group of viruses with multiple genogroups (GG) and genotypes. More recently, naturally occurring recombinant noroviruses were described. These viruses had a distinct polymerase gene sequence (designated GGIIb/Hilversum) and were disseminated through waterborne and food-borne transmission in Europe.

Objectives: Our aim was to characterize these emerging recombinant noroviruses causing outbreaks of gastro-enteritis in Hungary.

Study design: From January 2001 to May 2004, samples containing "GGIIb/Hilversum polymerase" (GGIIb-pol) were selected for analysis of the viral capsid region (ORF2) by reverse transcription-polymerase chain reaction (RT-PCR) and sequencing.

Results: Thirty-four (14.4%) of 236 confirmed norovirus outbreaks were caused by the variant lineage with the GGIIb-pol. Four different recombinants were detected with capsids of Hu/NLV/GGII/Mexico/1989 (n=9, 43%), Hu/NLV/GGII/Snow Mountain/1976 (n=6, 28%), Hu/NLV/GGII/Hawaii/1971 (n=4, 19%) and Hu/NLV/GGII/Lordsdale/1993 (n=1, 5%).

Conclusions: In Hungary, emerging recombinant noroviruses became the second most common norovirus variants-next to GGII-4/Lordsdale virus-causing epidemics of gastroenteritis in the last 4 years.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Caliciviridae Infections / epidemiology*
  • Caliciviridae Infections / transmission
  • Caliciviridae Infections / virology
  • Capsid / classification*
  • Communicable Diseases, Emerging / epidemiology*
  • Communicable Diseases, Emerging / transmission
  • Communicable Diseases, Emerging / virology
  • Disease Outbreaks*
  • Gastroenteritis / epidemiology*
  • Gastroenteritis / virology
  • Humans
  • Hungary / epidemiology
  • Molecular Epidemiology
  • Molecular Sequence Data
  • Norovirus / classification*
  • Norovirus / genetics
  • Norovirus / isolation & purification
  • Phylogeny
  • Recombination, Genetic*
  • Sequence Analysis, DNA

Associated data

  • GENBANK/AF468660
  • GENBANK/AY672561
  • GENBANK/AY672562
  • GENBANK/AY672563
  • GENBANK/AY672564
  • GENBANK/AY672565
  • GENBANK/AY672566
  • GENBANK/AY672567
  • GENBANK/AY672568
  • GENBANK/AY672569
  • GENBANK/AY672570
  • GENBANK/AY672571
  • GENBANK/AY672572
  • GENBANK/AY672573
  • GENBANK/AY672574
  • GENBANK/AY672575