Database resources of the National Center for Biotechnology Information
- PMID: 16381840
- PMCID: PMC1347520
- DOI: 10.1093/nar/gkj158
Database resources of the National Center for Biotechnology Information
Abstract
In addition to maintaining the GenBank nucleic acid sequence database, the National Center for Biotechnology Information (NCBI) provides analysis and retrieval resources for the data in GenBank and other biological data made available through NCBI's Web site. NCBI resources include Entrez, the Entrez Programming Utilities, MyNCBI, PubMed, PubMed Central, Entrez Gene, the NCBI Taxonomy Browser, BLAST, BLAST Link (BLink), Electronic PCR, OrfFinder, Spidey, Splign, RefSeq, UniGene, HomoloGene, ProtEST, dbMHC, dbSNP, Cancer Chromosomes, Entrez Genomes and related tools, the Map Viewer, Model Maker, Evidence Viewer, Clusters of Orthologous Groups, Retroviral Genotyping Tools, HIV-1, Human Protein Interaction Database, SAGEmap, Gene Expression Omnibus, Entrez Probe, GENSAT, Online Mendelian Inheritance in Man, Online Mendelian Inheritance in Animals, the Molecular Modeling Database, the Conserved Domain Database, the Conserved Domain Architecture Retrieval Tool and the PubChem suite of small molecule databases. Augmenting many of the Web applications are custom implementations of the BLAST program optimized to search specialized datasets. All of the resources can be accessed through the NCBI home page at: http://www.ncbi.nlm.nih.gov.
Similar articles
-
Database resources of the National Center for Biotechnology Information.Nucleic Acids Res. 2007 Jan;35(Database issue):D5-12. doi: 10.1093/nar/gkl1031. Epub 2006 Dec 14. Nucleic Acids Res. 2007. PMID: 17170002 Free PMC article.
-
Database resources of the National Center for Biotechnology Information.Nucleic Acids Res. 2008 Jan;36(Database issue):D13-21. doi: 10.1093/nar/gkm1000. Epub 2007 Nov 27. Nucleic Acids Res. 2008. PMID: 18045790 Free PMC article.
-
Database resources of the National Center for Biotechnology Information.Nucleic Acids Res. 2011 Jan;39(Database issue):D38-51. doi: 10.1093/nar/gkq1172. Epub 2010 Nov 21. Nucleic Acids Res. 2011. PMID: 21097890 Free PMC article.
-
Database resources of the National Center for Biotechnology Information.Nucleic Acids Res. 2021 Jan 8;49(D1):D10-D17. doi: 10.1093/nar/gkaa892. Nucleic Acids Res. 2021. PMID: 33095870 Free PMC article. Review.
-
NCBI genetic resources supporting immunogenetic research.Rev Immunogenet. 2000;2(4):461-7. Rev Immunogenet. 2000. PMID: 12361089 Review.
Cited by
-
Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome.Genome Biol. 2007;8(6):R127. doi: 10.1186/gb-2007-8-6-r127. Genome Biol. 2007. PMID: 17594509 Free PMC article.
-
Identification of human tRNA:m5C methyltransferase catalysing intron-dependent m5C formation in the first position of the anticodon of the pre-tRNA Leu (CAA).Nucleic Acids Res. 2006;34(20):6034-43. doi: 10.1093/nar/gkl765. Epub 2006 Oct 27. Nucleic Acids Res. 2006. PMID: 17071714 Free PMC article.
-
XML schemas for common bioinformatic data types and their application in workflow systems.BMC Bioinformatics. 2006 Nov 6;7:490. doi: 10.1186/1471-2105-7-490. BMC Bioinformatics. 2006. PMID: 17087823 Free PMC article.
-
Inter- and intra-combinatorial regulation by transcription factors and microRNAs.BMC Genomics. 2007 Oct 30;8:396. doi: 10.1186/1471-2164-8-396. BMC Genomics. 2007. PMID: 17971223 Free PMC article.
-
DOUTfinder--identification of distant domain outliers using subsignificant sequence similarity.Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W214-8. doi: 10.1093/nar/gkl332. Nucleic Acids Res. 2006. PMID: 16844996 Free PMC article.
References
-
- Schuler G.D., Epstein J.A., Ohkawa H., Kans J.A. Entrez: molecular biology database and retrieval system. Methods Enzymol. 1996;266:141–162. - PubMed
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources
Other Literature Sources
Research Materials
