Experimental and computational investigation of the uncatalyzed rearrangement and elimination reactions of isochorismate

J Am Chem Soc. 2006 Feb 15;128(6):2043-51. doi: 10.1021/ja056714x.

Abstract

The versatile biosynthetic intermediate isochorismate decomposes in aqueous buffer by two competitive pathways, one leading to isoprephenate by a facile Claisen rearrangement and the other to salicylate via elimination of the enolpyruvyl side chain. Computation suggests that both processes are concerted but asynchronous pericyclic reactions, with considerable C-O cleavage in the transition state but relatively little C-C bond formation (rearrangement) or hydrogen atom transfer to the enolpyruvyl side chain (elimination). Kinetic experiments show that rearrangement is roughly 8-times more favorable than elimination. Moreover, transfer of the C2 hydrogen atom to C9 was verified by monitoring the decomposition of [2-(2)H]isochorismate, which was prepared chemoenzymatically from labeled shikimate, by (2)H NMR spectroscopy and observing the appearance of [3-(2)H]pyruvate. Finally, the isotope effects obtained with the C2 deuterated substrate are in good agreement with calculations assuming pericyclic reaction mechanisms. These results provide a benchmark for mechanistic investigations of isochorismate mutase and isochorismate pyruvate lyase, the enzymes that respectively catalyze the rearrangement and elimination reactions in plants and bacteria.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chorismate Mutase / chemistry
  • Chorismate Mutase / metabolism
  • Chorismic Acid / chemical synthesis
  • Chorismic Acid / chemistry*
  • Chorismic Acid / metabolism
  • Cyclohexenes
  • Deuterium / chemistry
  • Hot Temperature
  • Isotope Labeling
  • Kinetics
  • Models, Molecular
  • Nuclear Magnetic Resonance, Biomolecular
  • Oxo-Acid-Lyases / chemistry
  • Oxo-Acid-Lyases / metabolism

Substances

  • Cyclohexenes
  • isochorismic acid
  • Deuterium
  • Oxo-Acid-Lyases
  • chorismate pyruvate lyase
  • Chorismate Mutase
  • Chorismic Acid