Cloning, purification, crystallization and preliminary structural studies of penicillin V acylase from Bacillus subtilis

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jul 1;61(Pt 7):680-3. doi: 10.1107/S1744309105017987. Epub 2005 Jun 15.

Abstract

Penicillin acylase proteins are amidohydrolase enzymes that cleave penicillins at the amide bond connecting the side chain to their beta-lactam nucleus. An unannotated protein from Bacillus subtilis has been expressed in Escherichia coli, purified and confirmed to possess penicillin V acylase activity. The protein was crystallized using the hanging-drop vapour-diffusion method from a solution containing 4 M sodium formate in 100 mM Tris-HCl buffer pH 8.2. Diffraction data were collected under cryogenic conditions to a spacing of 2.5 A. The crystals belonged to the orthorhombic space group C222(1), with unit-cell parameters a = 111.0, b = 308.0, c = 56.0 A. The estimated Matthews coefficient was 3.23 A3 Da(-1), corresponding to 62% solvent content. The structure has been solved using molecular-replacement methods with B. sphaericus penicillin V acylase (PDB code 2pva) as the search model.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacillus subtilis / enzymology*
  • Cloning, Molecular
  • Crystallography, X-Ray / methods*
  • Databases, Protein
  • Diffusion
  • Formates / pharmacology
  • Hydrogen-Ion Concentration
  • Molecular Sequence Data
  • Penicillin Amidase / chemistry*
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Sequence Homology, Amino Acid

Substances

  • Formates
  • Recombinant Proteins
  • formic acid
  • Penicillin Amidase

Associated data

  • PDB/2PVA