DRTF: a database of rice transcription factors

Bioinformatics. 2006 May 15;22(10):1286-7. doi: 10.1093/bioinformatics/btl107. Epub 2006 Mar 21.


Summary: DRTF contains 2025 putative transcription factors (TFs) in Oryza sativa L. ssp. indica and 2384 in ssp. japonica, distributed in 63 families, identified by computational prediction and manual curation. It includes detailed annotations of each TF including sequence features, functional domains, Gene Ontology assignment, chromosomal localization, EST and microarray expression information, as well as multiple sequence alignment of the DNA-binding domains for each TF family. The database can be browsed and searched with a user-friendly web interface.

Availability: DRTF is available at http://drtf.cbi.pku.edu.cn

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Database Management Systems*
  • Databases, Protein*
  • Information Storage and Retrieval / methods*
  • Internet
  • Oryza / genetics*
  • Oryza / metabolism*
  • Transcription Factors / classification
  • Transcription Factors / genetics*
  • User-Computer Interface*


  • Transcription Factors