Ribosome dynamics: insights from atomic structure modeling into cryo-electron microscopy maps

Annu Rev Biophys Biomol Struct. 2006:35:299-317. doi: 10.1146/annurev.biophys.35.040405.101950.

Abstract

Single-particle cryo-electron microscopy (cryo-EM) is the method of choice for studying the dynamics of macromolecular machines both at a phenomenological and, increasingly, at the molecular level, with the advent of high-resolution component X-ray structures and of progressively improving fitting algorithms. Cryo-EM has shed light on the structure of the ribosome during the four steps of translation: initiation, elongation, termination, and recycling. Interpretation of cryo-EM reconstructions of the ribosome in quasi-atomic detail reveals a picture in which the ribosome uses RNA not only to catalyze chemical reactions, but also as a means for signal transduction over large distances.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Computer Simulation
  • Cryoelectron Microscopy / methods*
  • Models, Chemical*
  • Models, Molecular*
  • Motion
  • Protein Conformation
  • Ribosomal Proteins / chemistry*
  • Ribosomal Proteins / ultrastructure*
  • Ribosomes / chemistry*
  • Ribosomes / ultrastructure*
  • Signal Transduction
  • Structure-Activity Relationship

Substances

  • Ribosomal Proteins