Toward bifunctional antibody catalysis

Bioorg Med Chem. 2006 Sep 15;14(18):6189-96. doi: 10.1016/j.bmc.2006.05.071. Epub 2006 Jun 16.

Abstract

Antibodies that catalyze the deprotonation of unactivated benzisoxazoles to give the corresponding salicylonitriles were prepared using as antigen a 2-aminobenzimidazolium derivative coupled to a carrier protein via its benzene ring. The hapten was designed to induce an antibody binding site with both a base and an acid, in position to initiate proton transfer and stabilize developing negative charge at the phenoxide leaving group, respectively. Consistent with this design, the catalysts exhibit bell-shaped pH-rate profiles, while chemical modification identified several functional groups that could participate in bifunctional catalysis. One of the antibodies, 13G5, is particularly notable in catalyzing the elimination of 6-glutaramidebenzisoxazole with a > 10(5)-fold rate acceleration over background and an effective molarity of > 10(4) M for its catalytic base. These properties compare favorably to the efficiencies achieved by the best previously characterized antibodies with substantially more reactive substrates.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibodies, Catalytic / biosynthesis
  • Antibodies, Catalytic / chemistry*
  • Benzimidazoles / chemical synthesis
  • Benzimidazoles / chemistry
  • Binding Sites
  • Catalysis
  • Haptens / chemistry*
  • Hydrogen-Ion Concentration
  • Kinetics
  • Molecular Structure
  • Structure-Activity Relationship
  • Thyroglobulin / chemical synthesis
  • Thyroglobulin / chemistry*
  • Thyroglobulin / isolation & purification

Substances

  • Antibodies, Catalytic
  • Benzimidazoles
  • Haptens
  • Thyroglobulin
  • 2-aminobenzimidazole