Thermal stability of dehydrophenylalanine-containing model peptides as probed by infrared spectroscopy: a case study of an alpha-helical and a 3(10)-helical peptide

Chem Biodivers. 2006 Mar;3(3):284-95. doi: 10.1002/cbdv.200690031.

Abstract

The temperature-dependent secondary-structural changes in the two known helical model peptides Boc-Val-deltaPhe-Ala-Leu-Gly-OMe (1; alpha-helical) and Boc-Leu-Phe-Ala-deltaPhe-Leu-OMe (2; 3(10)-helical), which both comprise a single dehydrophenylalanine (deltaPhe) residue, were investigated by means of FT-IR spectroscopy (peptide film on KBr). Both the first-order and the better-resolved second-order derivative IR spectra of 1 and 2 were analyzed. The nu(NH) (3240-3340 cm(-1)), the Amide-I (1600-1700 cm(-1)), and the Amide-II (1510-1580 cm(-1)) regions of 1 and 2 showed significant differences in thermal-denaturation experiments (22 degrees --> 144 degrees), with the 3(10)-helical peptide (2) being considerably more stable. This observation was rationalized by different patterns and strengths of intramolecular H-bonds, and was qualitatively related to the different geometries of the peptides. Also, a fair degree of residual secondary-structural elements were found even in the 'denatured' states above 104 degrees (1) or 134 degrees (2).

Publication types

  • Comparative Study

MeSH terms

  • Drug Stability
  • Hot Temperature*
  • Models, Molecular*
  • Peptide Fragments / analysis
  • Peptide Fragments / chemistry*
  • Phenylalanine / analogs & derivatives*
  • Phenylalanine / analysis
  • Phenylalanine / chemistry
  • Protein Structure, Secondary
  • Spectroscopy, Fourier Transform Infrared / methods
  • Thermodynamics

Substances

  • Peptide Fragments
  • Phenylalanine
  • phenyldehydroalanine