Identification of a novel tumor suppressor gene p34 on human chromosome 6q25.1

Cancer Res. 2007 Jan 1;67(1):93-9. doi: 10.1158/0008-5472.CAN-06-2723.

Abstract

In this study, we observed loss of heterozygosity (LOH) in human chromosomal fragment 6q25.1 in sporadic lung cancer patients. LOH was observed in 65% of the 26 lung tumors examined and was narrowed down to a 2.2-Mb region. Single-nucleotide polymorphism (SNP) analysis of genes located within this region identified a candidate gene, termed p34. This gene, also designated as ZC3H12D, C6orf95, FLJ46041, or dJ281H8.1, carries an A/G nonsynonymous SNP at codon 106, which alters the amino acid from lysine to arginine. Nearly 73% of heterozygous lung cancer tissues with LOH and the A/G SNP also exhibited loss of the A allele. In vitro clonogenic and in vivo nude mouse studies showed that overexpression of the A allele exerts tumor suppressor function compared with the G allele. p34 is located within a recently mapped human lung cancer susceptibility locus, and association of the p34 A/G SNP was tested among these families. No significant association between the less frequent G allele and lung cancer susceptibility was found. Our results suggest that p34 may be a novel tumor suppressor gene involved in sporadic lung cancer but it seems not to be the candidate familial lung cancer susceptibility gene linked to chromosomal region 6q23-25.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural

MeSH terms

  • Alleles
  • Animals
  • Base Sequence
  • Chromosomes, Human, Pair 6*
  • Codon
  • Female
  • Genes, Tumor Suppressor*
  • Genetic Predisposition to Disease
  • Humans
  • Loss of Heterozygosity*
  • Lung Neoplasms / genetics*
  • Mice
  • Mice, Nude
  • Molecular Sequence Data
  • Polymorphism, Single Nucleotide

Substances

  • Codon