Phylogenetic diversity of archaea and bacteria in the anoxic zone of a meromictic lake (Lake Pavin, France)

Appl Environ Microbiol. 2007 Mar;73(6):2016-9. doi: 10.1128/AEM.01490-06. Epub 2007 Jan 19.

Abstract

The compositions of archaeal and bacterial populations at different depths (60 m [mixolimnion-chemocline interface], 70 m [chemocline-subchemocline interface], 90 m, and 92 m [the water-sediment interface]) in the anoxic zone of the water column in Lake Pavin, a freshwater permanently stratified mountain lake in France, were determined. Phylogenetic trees were constructed from sequences to assess archaeal and bacterial diversity at the four sites.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Archaea / classification*
  • Archaea / isolation & purification*
  • Bacteria / classification*
  • Bacteria / isolation & purification*
  • Base Sequence
  • DNA, Archaeal / genetics
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • France
  • Fresh Water / microbiology*
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Water Microbiology

Substances

  • DNA, Archaeal
  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ785297
  • GENBANK/DQ785298
  • GENBANK/DQ785299
  • GENBANK/DQ785300
  • GENBANK/DQ785301
  • GENBANK/DQ785302
  • GENBANK/DQ785303
  • GENBANK/DQ785304
  • GENBANK/DQ785305
  • GENBANK/DQ785306
  • GENBANK/DQ785307