Flavobacterium defluvii sp. nov., isolated from activated sludge

Int J Syst Evol Microbiol. 2007 Feb;57(Pt 2):233-237. doi: 10.1099/ijs.0.64669-0.

Abstract

A Gram-negative bacterium, designated strain EMB117T, was isolated from a municipal wastewater treatment plant and characterized by polyphasic taxonomy. The cells were non-spore-forming rods that showed gliding motility. Optimal growth occurred at 25-30 degrees C and pH 7.0-8.0. Strain EMB117T contained phosphatidylethanolamine as the predominant polar lipid, and the major fatty acids were iso-C(15 : 0), iso-C(17 : 0) 3-OH, iso-C(15 : 0) 3-OH and summed feature 3 (C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH). The G+C content of the genomic DNA was 33.5 mol% and the major isoprenoid quinone was MK-6. A phylogenetic analysis based on 16S rRNA gene sequences showed that strain EMB117T belonged to the genus Flavobacterium and was most closely related to Flavobacterium johnsoniae DSM 425(T) (97.8 % sequence similarity). The DNA-DNA relatedness between strain EMB117T and F. johnsoniae ATCC 17061T was about 18 %. On the basis of the phenotypic, chemotaxonomic and molecular data, strain EMB117T represents a novel species within the genus Flavobacterium, for which the name Flavobacterium defluvii sp. nov. is proposed. The type strain is EMB117T (=KCTC 12612T=DSM 17963T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Fatty Acids / chemistry
  • Flavobacterium / classification*
  • Flavobacterium / cytology
  • Flavobacterium / isolation & purification*
  • Flavobacterium / physiology
  • Genes, rRNA / genetics
  • Hydrogen-Ion Concentration
  • Korea
  • Molecular Sequence Data
  • Movement
  • Nucleic Acid Hybridization
  • Phosphatidylethanolamines / analysis
  • Phosphatidylethanolamines / isolation & purification
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sewage / microbiology*
  • Temperature
  • Water Microbiology

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Phosphatidylethanolamines
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Sewage
  • phosphatidylethanolamine

Associated data

  • GENBANK/DQ372986