Tamlana crocina gen. nov., sp. nov., a marine bacterium of the family Flavobacteriaceae, isolated from beach sediment in Korea

Int J Syst Evol Microbiol. 2007 Apr;57(Pt 4):764-769. doi: 10.1099/ijs.0.64720-0.

Abstract

A Gram-negative, aerobic, saffron-coloured marine bacterium, designated HST1-43(T), was isolated from beach sediment on the coast in Jeju, Korea, and its taxonomic status was established in a polyphasic study. 16S rRNA gene sequence analyses revealed that the isolate belonged to the family Flavobacteriaceae. The closest phylogenetic neighbours of strain HST1-43(T) were members of the genera Algibacter, Gaetbulibacter and Yeosuana, with levels of sequence similarity in the range 96.3-96.5 %. The isolate was non-motile and required sea salts or natural seawater for growth. The optimum temperature and pH ranges for growth were 25-30 degrees C and pH 6.1-8.1, respectively. MK-6 was the major menaquinone. The dominant cellular fatty acids were iso-C(15 : 0), C(18 : 0), C(16 : 0), iso-C(15 : 1) and iso-C(17 : 0) 3-OH. The DNA G+C content was 36.2+/-0.4 mol%. On the basis of phylogenetic distance and phenotypic characteristics, the isolate is considered to represent a novel genus and species in the family Flavobacteriaceae, for which the name Tamlana crocina gen. nov., sp. nov. is proposed. The type strain is HST1-43(T) (=KCTC 12721(T)=JCM 14021(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / isolation & purification
  • Flavobacteriaceae / physiology
  • Geologic Sediments / microbiology*
  • Korea
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AM286230