The ins and outs of ATP-dependent chromatin remodeling in budding yeast: biophysical and proteomic perspectives

Biochim Biophys Acta. 2007 Mar;1769(3):153-71. doi: 10.1016/j.bbaexp.2007.01.013. Epub 2007 Feb 9.

Abstract

ATP-dependent chromatin remodeling is performed by multi-subunit protein complexes. Over the last years, the identity of these factors has been unveiled in yeast and many parallels have been drawn with animal and plant systems, indicating that sophisticated chromatin transactions evolved prior to their divergence. Here we review current knowledge pertaining to the molecular mode of action of ATP-dependent chromatin remodeling, from single molecule studies to genome-wide genetic and proteomic studies. We focus on the budding yeast versions of SWI/SNF, RSC, DDM1, ISWI, CHD1, INO80 and SWR1.

Publication types

  • Review

MeSH terms

  • Adenosine Triphosphate / pharmacology*
  • Chromatin Assembly and Disassembly*
  • Genome, Fungal
  • Nuclear Proteins / metabolism*
  • Proteome*
  • Saccharomycetales / genetics
  • Saccharomycetales / growth & development
  • Saccharomycetales / metabolism*

Substances

  • Nuclear Proteins
  • Proteome
  • Adenosine Triphosphate