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. 2007 Jun;10(6):779-86.
doi: 10.1038/nn1901. Epub 2007 May 13.

The dynamics of memory as a consequence of optimal adaptation to a changing body

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The dynamics of memory as a consequence of optimal adaptation to a changing body

Konrad P Kording et al. Nat Neurosci. 2007 Jun.

Abstract

There are many causes for variation in the responses of the motor apparatus to neural commands. Fast-timescale disturbances occur when muscles fatigue. Slow-timescale disturbances occur when muscles are damaged or when limb dynamics change as a result of development. To maintain performance, motor commands need to adapt. Computing the best adaptation in response to any performance error results in a credit assignment problem: which timescale is responsible for this disturbance? Here we show that a Bayesian solution to this problem accounts for numerous behaviors of animals during both short- and long-term training. Our analysis focused on characteristics of the oculomotor system during learning, including the effects of time passage. However, we suggest that learning and memory in other paradigms, such as reach adaptation, adaptation of visual neurons and retrieval of declarative memories, largely follow similar rules.

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Figures

Figure 1
Figure 1
A generative model for changes in the motor plant and the corresponding response of a Bayesian learner to performance errors. For illustrative purposes, here we show the results of a simulation with just two timescales. a) Various disturbances d evolve over time as independent random walks that linearly combine to change the motor gain. The observed error is a noisy version of the gain disturbance. b) Sample disturbances and the resulting motor gain. c) The Bayesian learner’s belief during an experiment where a disturbance suddenly increases the gain of the motor plant. Before the learner observes the gain, it has a prior belief. The learner’s belief can be represented by its current estimate of the fast and slow disturbances and its uncertainty about this estimate. This is termed a prior and is shown in yellow. In this case, the prior has a larger uncertainty along the fast state. In each trial, the learner observes the disturbance to the motor gain (in this case a 30% increase). This observation is represented by the blue line. The observation is a line and not a point because the disturbance could be due to a fast timescale with magnitude of 30%, a slow timescale with magnitude of 30%, or any other point along this line. Because the learner has sensory noise, there is a probability distribution associated with its observation, and therefore the blue line is hazy. To solve the credit assignment problem, the learner integrates its observation (blue line) with the prior belief (yellow cloud) to generate a posterior estimate (red cloud). In this case, because uncertainty was greater for the faster timescales, the observation was mostly assigned to a fast timescale perturbation. d) The perturbation is sustained for 30 trials. Now the learner associates the perturbation with a slow timescale.
Figure 2
Figure 2
Short-term and long-term behavior in response to saccadic gain changes. a) Short-term training. Each dot represents one saccade, the thick lines are exponential fits to the intervals [0:1400] and [1400:2800]. Starting at saccade number 0,a target is displayed and as soon as the saccade starts, the target jumps back by 30%. The adaptation that would negate this target jump is indicated as horizontal dashed lines. This manipulation ends at saccade number 1400, beyond which are washout trials. Reprinted with permission. b) The same plot is shown for the Bayesian learner. The color plot shows the learner’s estimates of the state of each disturbance (we have assumed 30 different states, ranging from very short to very long). The estimate of the mean of each disturbance, before updating with the new feedback, is plotted using a color that becomes blue for more negative values (gain less than unity), and red for more positive values (gain greater than unity). The sum of the various states is the expected gain of the motor plant with respect to unity. The sub-plots below this figure show the belief of the Bayesian learner during the initial stages of gain-decrease and then after 30 trials, approximated by two timescales. c) Long-term training. In this experiment the saccadic gain was reduced over many days of training. At the end of each training session the monkey was blind-folded and held in darkness for the remainder of the day. Note that the rate of re-learning in day 2 following darkness is faster than initial learning. Black lines show exponential fits to the data. d) The same plot for the Bayesian learner along with a colorplot showing the estimate of the learner of the disturbance at each timescale. e) Comparison of the saccadic gain change time course obtained by fitting an exponential function to the set of all saccades during the day.
Figure 3
Figure 3
The double reversal paradigm. a) The gain is first adapted up until it reaches about 1.2 with a target jump of +35%. Then it is adapted down with a target jump of -35%. Once the gain reaches unity it is again adapted up with a positive target jump. Data from Kojima et al. The box indicates the trials where the line was fitted. The number on the line indicates its slope. b) The speed of adaptation (slope of the lines in part a) is compared between the first gain-up and the second gain-up trials in different sessions of training. The monkey exhibits savings in that it re-learns faster despite the apparent washout. c) The performance of the Bayesian learner is shown along with a colorplot showing the estimate of the learner of the disturbance at each timescale. d) The rate of adaptation for the Bayesian learner. e) In this experiment, the reversal training is followed by a period of darkness, and then gain-up adaptation. Saccade gain shows spontaneous recovery. f) The same plot for the Bayesian learner along with a colorplot showing the estimate of the disturbance at each timescale. g) In this experiment, the period of darkness is followed by a condition where the target does not change position during the saccade period (i.e., no intra-saccadic step, ISS). The animal does not show spontaneous recovery. h) The same plot for the Bayesian learner along with a colorplot showing the estimate of the disturbance at each timescale..
Figure 4
Figure 4
The Bayesian learner outside of movement settings. a) The response of a neuron in the fly is shown to a visual stimulus that changes its standard deviation, switching between two levels (reprinted from 16). b) The data is modeled by a system with many timescales that drifts towards a mean of 40 spikes/second. c) Declarative memory data reprinted . For word translations that had been learned with different intervals between training sessions the retention function is shown. d) The retention function of a Bayesian learner

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