Structural evidence for the evolution of xyloglucanase activity from xyloglucan endo-transglycosylases: biological implications for cell wall metabolism

Plant Cell. 2007 Jun;19(6):1947-63. doi: 10.1105/tpc.107.051391. Epub 2007 Jun 8.

Abstract

High-resolution, three-dimensional structures of the archetypal glycoside hydrolase family 16 (GH16) endo-xyloglucanases Tm-NXG1 and Tm-NXG2 from nasturtium (Tropaeolum majus) have been solved by x-ray crystallography. Key structural features that modulate the relative rates of substrate hydrolysis to transglycosylation in the GH16 xyloglucan-active enzymes were identified by structure-function studies of the recombinantly expressed enzymes in comparison with data for the strict xyloglucan endo-transglycosylase Ptt-XET16-34 from hybrid aspen (Populus tremula x Populus tremuloides). Production of the loop deletion variant Tm-NXG1-DeltaYNIIG yielded an enzyme that was structurally similar to Ptt-XET16-34 and had a greatly increased transglycosylation:hydrolysis ratio. Comprehensive bioinformatic analyses of XTH gene products, together with detailed kinetic data, strongly suggest that xyloglucanase activity has evolved as a gain of function in an ancestral GH16 XET to meet specific biological requirements during seed germination, fruit ripening, and rapid wall expansion.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Catalysis
  • Cell Wall / metabolism*
  • Chromatography, Gel
  • Cloning, Molecular
  • Crystallography, X-Ray
  • DNA, Complementary / metabolism
  • Evolution, Molecular*
  • Gene Deletion
  • Glucans
  • Glycoside Hydrolases / chemistry*
  • Kinetics
  • Molecular Sequence Data
  • Mutagenesis
  • Mutant Proteins / chemistry
  • Mutant Proteins / metabolism
  • Oligosaccharides / metabolism
  • Phylogeny
  • Plant Proteins / chemistry*
  • Protein Structure, Secondary
  • Recombinant Proteins / metabolism
  • Static Electricity
  • Structure-Activity Relationship
  • Substrate Specificity
  • Tropaeolum / enzymology*
  • Xylans

Substances

  • DNA, Complementary
  • Glucans
  • Mutant Proteins
  • Oligosaccharides
  • Plant Proteins
  • Recombinant Proteins
  • Xylans
  • xyloglucan
  • Glycoside Hydrolases
  • xyloglucan endo(1-4)-beta-D-glucanase

Associated data

  • GENBANK/AY032600
  • GENBANK/AY578086
  • GENBANK/L43094
  • GENBANK/X68254
  • GENBANK/X68255
  • PDB/2UWA
  • PDB/2UWB
  • PDB/2UWC