Despite a large amount of research into invasive species and their introductions, there have been no studies focused on macroalgal transport in ballast water. To address this, we collected replicate samples of ballast water from 12 ships in two Mediterranean harbours (Naples and Salerno). Filtered samples were kept in culture for a month at Mediterranean mean conditions (18 degrees C, 12:12h LD, 60micromol photons m(-2)s(-1)). Fifteen macroalgal taxa were cultured and differed according to the geographic origin of the ballast water. Most of the cultured algae were widely distributed species (e.g. Ulva spp. and Acinetospora-phase). However, Ulva ohnoi Hiraoka and Shimada, described from Japan, was hitherto unknown in the Mediterranean Sea. We show for the first time that ballast water can be an important vector for the transport of microscopic stages of macroalgae and that this can be a vector for the introduction of alien species.